Assist. Prof. Dr. Mostafa El-Amir | Immunology and Microbiology | Best Researcher Award
South Valley University Qena Egypt | Egypt
Assist. Prof. Dr. Mostafa El-Amir is a distinguished academic and researcher in microbiology and immunology at Qena Faculty of Medicine, South Valley University, Egypt. His career combines extensive medical training, advanced laboratory research, and international collaboration. He has developed expertise in microbiology, immunogenetics, molecular biology, and infection control, with significant contributions to understanding autoimmune diseases and microbial resistance. His work emphasizes translational research, bridging laboratory findings with clinical applications to address challenges such as neonatal sepsis, type 1 diabetes, and parasitic infections. Beyond research, Assist. Prof. Dr. Mostafa El-Amir has demonstrated strong leadership through his role as Manager of the Infection Prevention and Control Unit at South Valley University Hospitals, implementing strategies to reduce hospital-acquired infections and promote patient safety. He is also a committed educator, mentoring students and guiding young researchers in microbiology and immunology. With publications in internationally indexed journals and active participation in academic networks, Assist. Prof. Dr. Mostafa El-Amir has established himself as a respected researcher whose contributions extend from local healthcare improvements to international scientific collaborations. His dedication to advancing both medical science and community health reflects his dual commitment to academic excellence and societal impact.
Professional Profile
Scopus
Education
Assist. Prof. Dr. Mostafa El-Amir educational background reflects a steady advancement from general medical training to specialization in microbiology and immunology. He completed his undergraduate degree in Medicine and Surgery at South Valley University, followed by a master’s degree in microbiology and immunology at Assiut University. His master’s research focused on nosocomial infections, laying the foundation for his later interest in hospital infection control. Driven by a passion for advanced research, he pursued doctoral studies in microbiology and immunology at South Valley University. His doctoral thesis investigated genetic factors in autoimmune responses, particularly the role of type 1 diabetes-associated genes. During his studies, he joined the Immunogenetic Laboratory at Turku University in Finland, where he gained international research exposure and advanced technical training in molecular biology and immunogenetics. His academic path also included specialized training in leadership and teaching development, preparing him to serve both as a researcher and an educator. This blend of national and international training has shaped Dr. El-Amir into a well-rounded academic who integrates medical practice, laboratory research, and innovative teaching, making him a recognized scholar in his field.
Professional Experience
Assist. Prof. Dr. Mostafa El-Amir professional journey reflects a strong balance of medical service, academic teaching, and institutional leadership. He began his career as a House Officer at Sohag University Hospitals, gaining practical experience in internal medicine, pediatrics, surgery, ENT, obstetrics, and emergency care. Following this, he served as a Resident in Internal Medicine before moving into academia as a Demonstrator of Microbiology and Immunology at South Valley University. His teaching roles expanded as he became Assistant Lecturer, Lecturer, and later Assistant Professor of Microbiology and Immunology at Qena Faculty of Medicine. Alongside his teaching and research duties, Dr. El-Amir has played important administrative roles, most notably as the Manager of the Infection Prevention and Control Unit at South Valley University Hospitals, where he developed infection control protocols and oversaw their implementation. His international experience includes several research missions and a postdoctoral fellowship at Turku University in Finland, where he specialized in immunogenetics and molecular biology techniques. These experiences have enriched his career by combining local healthcare leadership with global scientific exposure. Today, he continues to integrate teaching, research, and community service, contributing significantly to medical education and healthcare improvement in Egypt.
Research Interests
Assist. Prof. Dr. Mostafa El-Amir research interests span microbiology, immunology, molecular genetics, and infection control. He has a particular focus on the genetic and immunological mechanisms of type 1 diabetes, exploring how HLA polymorphisms and other genetic factors influence disease susceptibility and autoimmune responses. His collaboration with the Finnish Pediatric Diabetes Register enabled him to contribute to groundbreaking studies on genetic predisposition to autoimmune diseases in different populations. He also has a strong interest in rapid diagnostic techniques for infectious diseases, having investigated PCR-based detection methods for neonatal sepsis and other microbial infections. Another significant area of his research lies in antimicrobial resistance and nosocomial infections, where he has studied resistant strains and developed strategies for hospital infection control. Additionally, he has explored the immunological impact of vitamin D receptor polymorphisms, the immunomodulatory potential of mesenchymal stem cells, and the genetic diversity of parasites such as Schistosoma haematobium. His research integrates molecular biology with applied clinical solutions, emphasizing translational outcomes that can improve diagnostics, treatment, and preventive strategies. Through this multidisciplinary approach, Assist. Prof. Dr. Mostafa El-Amir addresses both fundamental questions in immunology and urgent health concerns affecting communities worldwide.
Research Skills
Assist. Prof. Dr. Mostafa El-Amir is equipped with a comprehensive set of research and laboratory skills that enable him to conduct advanced investigations in microbiology and immunology. His foundational expertise includes microbial culture, biochemical testing, and antibiotic sensitivity analysis, which provide essential diagnostic and teaching skills. Building on this foundation, he has acquired advanced molecular biology capabilities such as plasmid profiling, ELISA assays, HLA typing, PCR optimization, and real-time PCR for analyzing single nucleotide polymorphisms. These techniques have been applied extensively in his studies on type 1 diabetes, autoimmune diseases, and infectious disease diagnostics. He has also gained experience in applying bioinformatics tools for literature review, data analysis, and molecular epidemiology, supporting the design and interpretation of complex studies. In addition, he has leadership experience in infection prevention and control, having managed institutional programs to reduce nosocomial infections. His skills extend beyond the laboratory to include computer proficiency with ICDL certification and fluency in English, which enables him to collaborate internationally and publish in leading journals. The combination of classical microbiological techniques, advanced genetic methodologies, and institutional leadership demonstrates his versatility and strength as a medical researcher and educator.
Awards and Honors
Throughout his career, Assist. Prof. Dr. Mostafa El-Amir has been recognized for his academic achievements, leadership roles, and contributions to research. His international recognition includes scientific missions and a postdoctoral fellowship at Turku University in Finland, where he contributed to immunogenetic studies and enhanced his expertise in molecular biology. These fellowships reflect international trust in his research capacity and mark significant milestones in his career development. Within South Valley University, he has been honored with appointments to key roles, including his promotion to Assistant Professor of Microbiology and Immunology and his leadership as Manager of the Infection Prevention and Control Unit. These responsibilities acknowledge his ability to lead both academically and institutionally. His research has also earned recognition through publication in respected journals indexed in Scopus, PubMed, and Web of Science, affirming the international reach of his work. Furthermore, his commitment to medical education has been recognized through his involvement in faculty development and teaching training programs. While his contributions are already widely acknowledged, his career trajectory positions him for further international honors, awards, and leadership recognition in the field of microbiology and immunology.
Publication Top Notes
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Diagnosis of onychomycosis clinically by nail dermoscopy versus microbiological diagnosis — 2020
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Rapid diagnosis of neonatal sepsis by PCR for detection of 16S rRNA gene, while blood culture and PCR results were similar in E. coli-predominant EOS cases — 2019
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HLA-B08 Carry a Risk for Type 1 Diabetes among Cow’s Milk Exposed Egyptian Infants and Unmarked Linkage Disequilibrium with DR3-DQA105-DQB1*02 Haplotype — 2019
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Vitamin D receptor rs7975232, rs731236 and rs1544410 single nucleotide polymorphisms, and 25-hydroxyvitamin D levels in Egyptian children with type 1 diabetes mellitus: effect of vitamin D co-therapy — 2019
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Immunomodulatory effect of mesenchymal stem cells: Cell origin and cell quality variations — 2019
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The association of the HLA-A24:02, B39:01 and B*39:06 alleles with type 1 diabetes is restricted to specific HLA-DR/DQ haplotypes in Finns — 2017
Conclusion
Assist. Prof. Dr. Mostafa El-Amir stands out as a highly accomplished researcher, educator, and leader in microbiology and immunology. His career reflects a unique combination of advanced scientific research, practical healthcare leadership, and dedicated teaching. His studies on type 1 diabetes genetics, autoimmune responses, microbial resistance, and parasitic infections contribute significantly to both scientific knowledge and public health solutions. With international training in Finland and collaborative research spanning Europe and Egypt, he has demonstrated his capacity to operate in global research environments while addressing pressing local health issues. His leadership in infection control at South Valley University Hospitals directly improved healthcare quality, while his mentorship of students continues to shape the next generation of medical professionals. Dr. El-Amir’s research is widely recognized through publications in high-impact journals, enhancing his academic profile and visibility. Looking forward, he is well-positioned to expand his international collaborations, increase his contributions to top-tier journals, and assume broader leadership roles in scientific networks. His outstanding academic contributions, leadership, and potential for future innovation make him a deserving candidate for international recognition and awards in the medical sciences.